The detailed information of tRNA gene sequence


Sequence ID>WENV183746572
Genome IDPOYE01019127
Search identical group
Phylum/Class[POYE] biofilm metagenome; steel pipe from biofilm reactor
Species
Start position on genome 280
End posion on genome 185
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gaccagataa
tRNA gene sequence 
GGAAGGCAATCGCACCCGGTGGTGCGGCCGGGCTTCAAACCCGGTTGGGGGCGGCAGCCG
CTCCCGGGTGAGTTCGACTCTCACTGCCTTCCGCCA
Downstream region at tRNA end position 
tctccttctc
Secondary structure (Cloverleaf model)
>WENV183746572	SeC	TCA
                   a      GCCA tctccttctc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    A     C A C T C     A
      C C C        T      | | | | |     G
    G       A C G C       G T G A G     C
    G       | | | |                 T T
    T       T G C G
      G G          G     TTGGGGGCGGCAGCCGCTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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