The detailed information of tRNA gene sequence


Sequence ID>WENV183746601
Genome IDPOYE01035908
Search identical group
Phylum/Class[POYE] biofilm metagenome; steel pipe from biofilm reactor
Species
Start position on genome 226
End posion on genome 318
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aacgggcgac
tRNA gene sequence 
GGAGGCGACAGGGGTCTGGTGGCCCTCCCGGTCTTCAAAACCGGAGACACGCCAACAGCG
TGTGGTGGGTTCGATTCCCATCCGCCTCCGCCA
Downstream region at tRNA end position 
gtcgtccctc
Secondary structure (Cloverleaf model)
>WENV183746601	SeC	TCA
                   c      GCCA gtcgtccctc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A   C          T T
                    C     T A C C C     A
      T C T        A      + | | | |     G
    G       G G G G       G T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     AGACACGCCAACAGCGTGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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