The detailed information of tRNA gene sequence


Sequence ID>WENV183746610
Genome IDPOYE01036291
Search identical group
Phylum/Class[POYE] biofilm metagenome; steel pipe from biofilm reactor
Species
Start position on genome 741
End posion on genome 829
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaatatcct
tRNA gene sequence 
GGATCGTTGGTCGAGAGGCCCAAGACGGCGGCTTGCTAAGCCGTGGCTGCGAAAGTGGCC
CGCTGGTTCGAATCCAGCACGATCCGCCA
Downstream region at tRNA end position 
tattgttttt
Secondary structure (Cloverleaf model)
>WENV183746610	Ser	GCT
                   t      GCCA tattgttttt
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C G A C C     A
      A G A        G      | | | | |     G
    G       G C T G       G C T G G     C
    G         | | |                 T T
    C       A G A C
      C C A        G     GGCTGCGAAAGTGGCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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