The detailed information of tRNA gene sequence


Sequence ID>WENV183746614
Genome IDPOYE01036291
Search identical group
Phylum/Class[POYE] biofilm metagenome; steel pipe from biofilm reactor
Species
Start position on genome 1315
End posion on genome 1406
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaccagatca
tRNA gene sequence 
GGATGGGTGCCCGAGTGGCCTATGGGCGCTGTTTCGAAAACAGATGGTCGGCTACCGCCG
GCGCGAGAGTTCGAATCTCTCCTCATCCGCCA
Downstream region at tRNA end position 
cttccaattt
Secondary structure (Cloverleaf model)
>WENV183746614	Ser	CGA
                   a      GCCA cttccaattt
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G + T
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C C       G A G A G     C
    G       + | | |                 T T
    C       T G G G
      C T A        C     TGGTCGGCTACCGCCGGCGC
                    G   A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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