The detailed information of tRNA gene sequence


Sequence ID>ENV08001159
Genome IDABMQ01006358
Search identical group
Phylum/Classsaltern metagenome; viral fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 39
End posion on genome 114
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aagtttctac
tRNA gene sequence 
TGCCCGATAGTTCAGCCGGTAGAACGGGTGACTGTTAATCACTATGTCGCAGGTTCGAGT
CCTGCTCGGGCAGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001159	Asn	GTT
                   c      GCCA nnnnnnnnnn
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T G
                    T     C G T C C     A
      C G A        A      | | | | |     G
    C       C T T G       G C A G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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