The detailed information of tRNA gene sequence


Sequence ID>ENV08001164
Genome IDABMQ01012050
Search identical group
Phylum/Classsaltern metagenome; viral fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 29
End posion on genome 104
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ctttaatttc
tRNA gene sequence 
GGGGAATTAGCTCAATCGGCAGAGCAATGTCTTGATAAGGCATATGTTATTGGTTCAAGT
CCAATATTCCCTACCA
Downstream region at tRNA end position 
tgcgnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001164	Ile	GAT
                   c      ACCA tgcgnnnnnn
                     G + T
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A          T G
                    T     T A A C C     A
      T A A        A      | | | | |     A
    C       C T C G       A T T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     ATGTT
                    A - T
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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