The detailed information of tRNA gene sequence


Sequence ID>ENV08001168
Genome IDABMQ01023473
Search identical group
Phylum/Classsaltern metagenome; viral fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 21
End posion on genome 97
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aagtattgat
tRNA gene sequence 
GTCCCCATCGTCTAGGCGGCCAAGGACTCTGGTTTCTCAGATCAGCAACACAGGTTCGAA
TCCTGTTGGGGACGCCA
Downstream region at tRNA end position 
agannnnnnn
Secondary structure (Cloverleaf model)
>ENV08001168	Glu	CTC
                   t      GCCA agannnnnnn
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G T C C     A
    C G G A        C      | | | | |     G
  G         T C T G       A C A G G     C
  G         + | | |                 T T
  C         G G A C
    C A A          T     CAAC
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK