The detailed information of tRNA gene sequence


Sequence ID>ENV08001178
Genome IDABMR01015205
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 91
End posion on genome 17
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctatcggtag
tRNA gene sequence 
GCTCCGTTGGTGTAGTCCGGCCAATCATATTGCCCTCTCACGGCAATGACCAGGGTTCAA
ATCCCTGACGGAGCAtct
Downstream region at tRNA end position 
gtgtttgtgt
Secondary structure (Cloverleaf model)
>ENV08001178	Glu	CTC
                   g      Atct gtgtttgtgt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     G T C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       C A G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        A     TGAC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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