The detailed information of tRNA gene sequence


Sequence ID>ENV08001179
Genome IDABMR01018468
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 86
End posion on genome 12
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caccaaaata
tRNA gene sequence 
TGGGCCATAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGTCGTCGGTTCGATCC
CGACTGGCTCCACCA
Downstream region at tRNA end position 
gtccatacag
Secondary structure (Cloverleaf model)
>ENV08001179	Ala	TGC
                   a      ACCA gtccatacag
                     T   C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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