The detailed information of tRNA gene sequence


Sequence ID>ENV08001187
Genome IDABMS01002786
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 95
End posion on genome 23
Amino Acid Pseudo
Anticodon CTG
Upstream region at tRNA start position 
tagcgggtgc
tRNA gene sequence 
AGTCCGTTGGGGTAGTGGCCAATCCTCTCGGATTCTGGGTCCGAGGACCCTGGTTCGAAT
CCAGGACGGACTAtgt
Downstream region at tRNA end position 
tggggtgcat
Secondary structure (Cloverleaf model)
>ENV08001187	Pseudo	CTG
                   c      Atgt tggggtgcat
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     G G A C C     A
      T G A        G      | | | | |     G
    G       T G G G       C C T G G     C
    G         | | +                 T T
    C       T C C T
      C A A        C     GGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       G
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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