The detailed information of tRNA gene sequence


Sequence ID>ENV08001190
Genome IDABMS01004115
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 34
End posion on genome 106
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position
gatgccagtg
tRNA gene sequence
TCCGGGTTGGGGTAGTGGTTATCCTTCAGCCTTGTGGAGGCTGAGACGCGGGTTCAATTC
TCGCACCCGGACCtc
Downstream region at tRNA end position
ccnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001190	His	GTG
                   g      CCtc ccnnnnnnnn
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     C G C T C     A
      T G A        G      | | | + |     A
    G       T G G G       G C G G G     C
    G         | | +                 T T
    T       T C C T
      T A          T     AGAC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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