The detailed information of tRNA gene sequence


Sequence ID>ENV08001192
Genome IDABMS01005266
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 30
End posion on genome 103
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cttttgcatt
tRNA gene sequence 
GGCTAGGTGGCAGAGTGGTGATGCAGCGGCCTGCAAAGCCGTGTACGCCGGTTCGATTCC
GGCCCTAGCCTCCA
Downstream region at tRNA end position 
caccgannnn
Secondary structure (Cloverleaf model)
>ENV08001192	Cys	GCA
                   t      TCCA caccgannnn
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C
                     G - C          T T
                    T     C G G C C     A
        G A        G      | | | | |     G
      T     G A C G       G C C G G     C
      G       | | |                 T T
      G     A T G C
        T G        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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