The detailed information of tRNA gene sequence


Sequence ID>ENV08001193
Genome IDABMS01005283
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 88
End posion on genome 17
Amino Acid Pseudo
Anticodon GGG
Upstream region at tRNA start position 
attttcatac
tRNA gene sequence 
GGGACCGTGGGGTAGTGGTATCCTCTGCCGCTGGGGGCGGCAGGACTCGAGTTCAATTCT
CGGCGGTCCCACtc
Downstream region at tRNA end position 
acctgtcgtc
Secondary structure (Cloverleaf model)
>ENV08001193	Pseudo	GGG
                   c      ACtc acctgtcgtc
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T T
                    T     G G C T C     A
        G A        G      + | | | |     A
      T     T G G G       T C G A G     C
      G       | | +                 T T
      G     T C C T
        T A        C     GGAC
                    T - A
                    G - C
                    C - G
                    C - G
                    G - C
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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