The detailed information of tRNA gene sequence


Sequence ID>WENV183750531
Genome IDPPYE01000002
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 12689
End posion on genome 12616
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaagaaacat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCATTCGTTCGAGT
CGGATCTCCGCAACta
Downstream region at tRNA end position 
caatgaggat
Secondary structure (Cloverleaf model)
>WENV183750531	fMet	CAT
                   t      ACta caatgaggat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T A G G C     A
      T G A        G      | | + | |     G
    T       C G A G       A T T C G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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