The detailed information of tRNA gene sequence


Sequence ID>WENV183750590
Genome IDPPYE01000038
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 103449
End posion on genome 103376
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnncat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCATTCGTTCGAGT
CGGATCTCCGCAACta
Downstream region at tRNA end position 
aagataagaa
Secondary structure (Cloverleaf model)
>WENV183750590	fMet	CAT
                   t      ACta aagataagaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T A G G C     A
      T G A        G      | | + | |     G
    T       C G A G       A T T C G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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