The detailed information of tRNA gene sequence


Sequence ID>WENV183750836
Genome IDPPYE01000474
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 13454
End posion on genome 13366
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccgaaaaaa
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACCCCAAAAGGGT
ATCCGGGGTTCGAATCCCTGTCTCTCCGCga
Downstream region at tRNA end position 
taaaggctga
Secondary structure (Cloverleaf model)
>WENV183750836	Ser	GGA
                   a      GCga taaaggctga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | + | | |     G
    G       G C T C       C G G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACCCCAAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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