The detailed information of tRNA gene sequence


Sequence ID>WENV183751012
Genome IDPPYE01001518
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 362
End posion on genome 274
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacccttgct
tRNA gene sequence 
GGAGAAATACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGCAACCGG
CGCGAGGGTTCAAATCCCTCTTTCTCCGCta
Downstream region at tRNA end position 
actacctgaa
Secondary structure (Cloverleaf model)
>WENV183751012	Ser	GCT
                   t      GCta actacctgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGCAACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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