The detailed information of tRNA gene sequence


Sequence ID>WENV183751027
Genome IDPPYE01001673
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1319
End posion on genome 1410
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctgaagatgt
tRNA gene sequence 
GGAAAGATGGCTGAGTTGGTCTAAGGCGCACGACTGGAAATCGTGTAACGTGTCAAAAGC
GTTCTGGGGTTCGAATCCCCATCTTTCCGCCA
Downstream region at tRNA end position 
gaaaccccgg
Secondary structure (Cloverleaf model)
>WENV183751027	Ser	GGA
                   t      GCCA gaaaccccgg
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     A C C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       T G G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          G     TAACGTGTCAAAAGCGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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