The detailed information of tRNA gene sequence


Sequence ID>WENV183751463
Genome IDPPYE01013894
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 92
End posion on genome 181
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtgcaacat
tRNA gene sequence 
GGAGACATGCCTGAGTGGCCGATAGGGGCACCCTGCTAAGGTGTTAGTCGTGTTTAGCGG
CTCGAGGGTTCGAATCCCTCTGTCTCCGCCg
Downstream region at tRNA end position 
actaggctcc
Secondary structure (Cloverleaf model)
>WENV183751463	Ser	GCT
                   t      GCCg actaggctcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G       + | | |                 T T
    C       T A G G
      C G A        G     TAGTCGTGTTTAGCGGCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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