The detailed information of tRNA gene sequence


Sequence ID>WENV183751589
Genome IDPPYE01021768
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1211
End posion on genome 1284
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcaactataT
tRNA gene sequence 
CGCGGAGTGGAGCAGTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTAAGTTCGAGTC
TTGCCTCCGCAACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV183751589	fMet	CAT
                   T      ACnn nnnnnnnnnn
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G T T C     A
        G A        G      | + | | |     G
      T     C G A G       G T A A G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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