The detailed information of tRNA gene sequence


Sequence ID>WENV183751624
Genome IDPPYE01023456
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 152
End posion on genome 58
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atcgaggcgc
tRNA gene sequence 
GGAAGATCGTCATCTCCGGTGAGGTGGCTGGACTTCAAATCCAGTTGGGGCCGCCAGCGG
TCCCGGGCAGGTTCAACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
gtttgcccct
Secondary structure (Cloverleaf model)
>WENV183751624	SeC	TCA
                   c      GCCA gtttgcccct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     A
    G       C T A C       G C A G G     C
    G       | + | |                 T T
    T       G G T G
      G A          G     TTGGGGCCGCCAGCGGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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