The detailed information of tRNA gene sequence


Sequence ID>WENV183751846
Genome IDPPYE01030047
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 47623
End posion on genome 47531
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtttccaagt
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCTAAGGCACTCGACTCGAAATCGAACGTGGGCTTTAAAAC
CCACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gtttttcagt
Secondary structure (Cloverleaf model)
>WENV183751846	Ser	CGA
                   t      GCCA gtttttcagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          A     CGTGGGCTTTAAAACCCACC
                    C   A
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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