The detailed information of tRNA gene sequence


Sequence ID>WENV183751957
Genome IDPPYE01030289
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 549
End posion on genome 462
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgaatgaccC
tRNA gene sequence 
GGAGAGGTATCGAAGCGGTCATAACGAGGCGGTCTTGAAAACCGTTTGTCCGAAAGGGCG
CGTGGGTTCGAATCCCACCCTCTCCGTta
Downstream region at tRNA end position 
gattccagca
Secondary structure (Cloverleaf model)
>WENV183751957	Ser	TGA
                   C      GTta gattccagca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | |                 T T
  C         A C G A
    A T A          G     TTGTCCGAAAGGGCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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