The detailed information of tRNA gene sequence


Sequence ID>WENV183751963
Genome IDPPYE01030297
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 42486
End posion on genome 42560
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ttcctacatt
tRNA gene sequence 
GGGCCTATAGCTCAGCGGTAGAGCCCCCGGCTCATAACCGGTTGGTCCTAGGTTCGAATC
CTAGTGGGCCCACCA
Downstream region at tRNA end position 
actgtataac
Secondary structure (Cloverleaf model)
>WENV183751963	Ile2	CAT
                   t      ACCA actgtataac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     G A T C C     A
        G A        A      | | | | |     G
      C     C T C G       C T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        C     TGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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