The detailed information of tRNA gene sequence


Sequence ID>WENV183752150
Genome IDPPYE01031339
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 287
End posion on genome 197
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcagctatat
tRNA gene sequence 
GGAGAAGTACCCAAGCTGGCCGAAGGGACACCCCTGGAAAGGGTGCAGGTCGTTAACAGC
GGCGCGAGGGTTCAAATCCCTCCTTCTCCGCtt
Downstream region at tRNA end position 
tgaatcaaat
Secondary structure (Cloverleaf model)
>WENV183752150	Ser	GGA
                   t      GCtt tgaatcaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
    T C G A        A      | | | | |     A
  G         A C C C       G A G G G     C
  G           | | |                 T T
  C         A G G G
    C G A          A     CAGGTCGTTAACAGCGGCGC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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