The detailed information of tRNA gene sequence


Sequence ID>ENV08001229
Genome IDABMV01022982
Search identical group
Phylum/Classstromatolite metagenome; microbial fraction from Highborne Cay microbiolite in the Bahamas
Species
Start position on genome 13
End posion on genome 112
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggcggtttgc
tRNA gene sequence 
GGAAGTGCTTGTACGCCTGGTGGCGGCCACGGTCTTCAAAACCGTCGGGCCGTACGATAA
CCGTGCGGCCGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
ttttctttgc
Secondary structure (Cloverleaf model)
>ENV08001229	SeC	TCA
                   c      GCCA ttttctttgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    T     T A C C C     A
      C C G        T      + | | | |     G
    T       C A T G       G T G G G     C
    G           + |                 T T
    G       C G G C
      T G G        C     CGGGCCGTACGATAACCGTGCGGCCG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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