The detailed information of tRNA gene sequence


Sequence ID>WENV183754055
Genome IDPPYE01081956
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1338
End posion on genome 1424
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attgtgacac
tRNA gene sequence 
GCAGGGGTATCGAAGTGGTCATAACGAGGCGGTCTTGAAAACCGTTTGTCCGCAAGGGCG
CGTGGGTTCGAATCCCACCCCCTGCGCtt
Downstream region at tRNA end position 
catatagggc
Secondary structure (Cloverleaf model)
>WENV183754055	Ser	TGA
                   c      GCtt catatagggc
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | |                 T T
  C         A C G A
    A T A          G     TTGTCCGCAAGGGCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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