The detailed information of tRNA gene sequence


Sequence ID>WENV183754297
Genome IDPPYE01090430
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 48709
End posion on genome 48782
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
acaataacat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCATTCGTTCGAGT
CGGATCTCCGCAACgc
Downstream region at tRNA end position 
attacagatg
Secondary structure (Cloverleaf model)
>WENV183754297	fMet	CAT
                   t      ACgc attacagatg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T A G G C     A
      T G A        G      | | + | |     G
    T       C G A G       A T T C G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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