The detailed information of tRNA gene sequence


Sequence ID>WENV183754333
Genome IDPPYE01090557
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 33108
End posion on genome 33194
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acacacattc
tRNA gene sequence 
GGAGAGATATCGAAGTGGTCATAACGAGGCGGTCTTGAAAACCGTTTGTCCGAAAGGGCG
CGTGGGTTCGAATCCCACTCTCTCCGCta
Downstream region at tRNA end position 
ggcattcgtg
Secondary structure (Cloverleaf model)
>WENV183754333	Ser	TGA
                   c      GCta ggcattcgtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | |                 T T
  C         A C G A
    A T A          G     TTGTCCGAAAGGGCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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