The detailed information of tRNA gene sequence


Sequence ID>WENV183755048
Genome IDPPYE01106343
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 10368
End posion on genome 10443
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttttgaatat
tRNA gene sequence 
CGCGGAGTAGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAGT
CCTGCCTCCGCAACCA
Downstream region at tRNA end position 
tatcgagtgg
Secondary structure (Cloverleaf model)
>WENV183755048	fMet	CAT
                   t      ACCA tatcgagtgg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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