The detailed information of tRNA gene sequence


Sequence ID>WENV183756043
Genome IDPPYE01121525
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 838
End posion on genome 925
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatcaggcaa
tRNA gene sequence 
GGAGAAATACTCAAGTGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGTTTGCGCGG
CGCGAGGGTTCAAATCCCTCTTTCTCCGtta
Downstream region at tRNA end position 
aggactcaaa
Secondary structure (Cloverleaf model)
>WENV183756043	Ser	GCT
                   a      Gtta aggactcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGTTTGCGCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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