The detailed information of tRNA gene sequence


Sequence ID>WENV183756105
Genome IDPPYE01125279
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 198
End posion on genome 287
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catggaatcT
tRNA gene sequence 
GGAGTAGTACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGCAACCGG
CGCGAGGGTTCAAATCCCTCCTGCTCCGTtg
Downstream region at tRNA end position 
acagaaagaa
Secondary structure (Cloverleaf model)
>WENV183756105	Ser	GCT
                   T      GTtg acagaaagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGCAACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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