The detailed information of tRNA gene sequence


Sequence ID>ENV08001251
Genome IDABMV01071359
Search identical group
Phylum/Classstromatolite metagenome; microbial fraction from Highborne Cay microbiolite in the Bahamas
Species
Start position on genome 109
End posion on genome 17
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnncgtgc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCTTATCCCC
GTATCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttcaaaag
Secondary structure (Cloverleaf model)
>ENV08001251	Ser	GGA
                   c      GCCA gtttcaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGGCTTATCCCCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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