The detailed information of tRNA gene sequence


Sequence ID>WENV183756225
Genome IDPPYE01129878
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 106788
End posion on genome 106859
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcaactatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTAAGTTCGAGTC
TTGCCTCCGCTTacg
Downstream region at tRNA end position 
tccgggggct
Secondary structure (Cloverleaf model)
>WENV183756225	fMet	CAT
                   t      Tacg tccgggggct
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G T T C     A
        G A        G      | + | | |     G
      T     C G A G       G T A A G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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