The detailed information of tRNA gene sequence


Sequence ID>WENV183756948
Genome IDPPYE01138968
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 3246
End posion on genome 3337
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgaagatgt
tRNA gene sequence 
GGAAAGATGGCTGAGTTGGTCTAAGGCGCACGACTGGAAATCGTGTAACGTGTCAAAAGC
GTTCTGGGGTTCGAATCCCCATCTTTCCGCCA
Downstream region at tRNA end position 
caaaacccag
Secondary structure (Cloverleaf model)
>WENV183756948	Ser	GGA
                   t      GCCA caaaacccag
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     A C C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       T G G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          G     TAACGTGTCAAAAGCGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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