The detailed information of tRNA gene sequence


Sequence ID>WENV183758620
Genome IDPPYE01187414
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 11886
End posion on genome 11813
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTCTGTTCGAGT
CAGGCCTCCGCAACta
Downstream region at tRNA end position 
aaaagaggat
Secondary structure (Cloverleaf model)
>WENV183758620	fMet	CAT
                   n      ACta aaaagaggat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G G A C     A
      T G A        G      | + | | |     G
    T       C G A G       G T C T G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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