The detailed information of tRNA gene sequence


Sequence ID>WENV183759795
Genome IDPPYE01212127
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1638
End posion on genome 1566
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aatactatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTAAGTTCGAGTC
TTGCCTCCGCAACtc
Downstream region at tRNA end position 
agtaagcctt
Secondary structure (Cloverleaf model)
>WENV183759795	fMet	CAT
                   t      ACtc agtaagcctt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G T T C     A
        G A        G      | + | | |     G
      T     C G A G       G T A A G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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