The detailed information of tRNA gene sequence


Sequence ID>WENV183759932
Genome IDPPYE01215248
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1195
End posion on genome 1105
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acatacagtt
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCTAAGGCGCACGATTGGAAATCGTGTATACGGGGAACCGT
ATCAAGGGTTCGAATCCCTTTCTCTCCGCCA
Downstream region at tRNA end position 
tatgtccgcc
Secondary structure (Cloverleaf model)
>WENV183759932	Ser	GGA
                   t      GCCA tatgtccgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       A A G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          G     TATACGGGGAACCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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