The detailed information of tRNA gene sequence


Sequence ID>ENV08001292
Genome IDABMW01000760
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 140
End posion on genome 68
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aagacgctct
tRNA gene sequence 
GGCCCGTTCGTCTATCGGTTAGGACCTCAGGTTTTCATCCTGGTAAGAGGGGTTCGACTC
CCCTACGGGCTACtt
Downstream region at tRNA end position 
aacttccaaa
Secondary structure (Cloverleaf model)
>ENV08001292	Glu	TTC
                   t      ACtt aacttccaaa
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          C     TAAG
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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