The detailed information of tRNA gene sequence


Sequence ID>WENV183760418
Genome IDPPYE01232920
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 40848
End posion on genome 40754
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atgcaggcgc
tRNA gene sequence 
GGAAGATCGTCATCTCCGGTGAGGTGGCTGGACTTCAAATCCAGTTGGGGGCGCCAGCGT
TCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
ataattttgg
Secondary structure (Cloverleaf model)
>WENV183760418	SeC	TCA
                   c      GCCA ataattttgg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T A C       G C A G G     C
    G       | + | |                 T T
    T       G G T G
      G A          G     TTGGGGGCGCCAGCGTTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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