The detailed information of tRNA gene sequence


Sequence ID>WENV183760428
Genome IDPPYE01232941
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 144
End posion on genome 232
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtaattgtaa
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACCCCTAAAGGGT
ATCACGAGTTCGAATCTCGTTCTCTCCGCat
Downstream region at tRNA end position 
cattttttta
Secondary structure (Cloverleaf model)
>WENV183760428	Ser	GGA
                   a      GCat cattttttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T G C T C     A
      T G A        G      | | | | |     G
    G       G C T C       A C G A G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACCCCTAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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