The detailed information of tRNA gene sequence


Sequence ID>ENV08001297
Genome IDABMW01007014
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 109
End posion on genome 34
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccctttttaa
tRNA gene sequence 
ACGGGTGTAGCTCAGCTGGTAGAGTAGTGGTCTCCAAAACCATTGGTCGTGGGTTCGAAC
CCTACCGCCCGTGCAA
Downstream region at tRNA end position 
aaacgtagaa
Secondary structure (Cloverleaf model)
>ENV08001297	Trp	CCA
                   a      GCAA aaacgtagaa
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          C A
                    T     C A T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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