The detailed information of tRNA gene sequence


Sequence ID>WENV183760891
Genome IDPPYE01242193
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1452
End posion on genome 1541
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cggcatgagc
tRNA gene sequence 
GGAAGGGTGGCAGAGCGGCTTAATGCGGCGGTCTTGAAAACCGTTGACGTCGTGAGGCGT
CCGGGGGTTCAAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
aactcaaaac
Secondary structure (Cloverleaf model)
>WENV183760891	Ser	TGA
                   c      GCCA aactcaaaac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       G A C G       G G G G G     C
    G         | | |                 T T
    C       A T G C
      T T A        G     TGACGTCGTGAGGCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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