The detailed information of tRNA gene sequence


Sequence ID>ENV08001300
Genome IDABMW01010919
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 30
End posion on genome 106
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaataattt
tRNA gene sequence 
GCGGGGGTAGCTCAGCTGGTTAGAGCATCGGATTCATAACCCGAAGGTCGGCAGTTCAAG
TCTGCTCTCCCGTACTA
Downstream region at tRNA end position 
aagccccaaa
Secondary structure (Cloverleaf model)
>ENV08001300	Met	CAT
                   t      ACTA aagccccaaa
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C          T G
                    T     T C G T C     A
      C G A        A      + | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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