The detailed information of tRNA gene sequence


Sequence ID>WENV183761160
Genome IDPPYE01256186
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 12688
End posion on genome 12615
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gctttatcat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCATTCGTTCGAGT
CGGATCTCCGCAACta
Downstream region at tRNA end position 
caatgaggat
Secondary structure (Cloverleaf model)
>WENV183761160	fMet	CAT
                   t      ACta caatgaggat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T A G G C     A
      T G A        G      | | + | |     G
    T       C G A G       A T T C G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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