The detailed information of tRNA gene sequence


Sequence ID>ENV08001302
Genome IDABMW01013274
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 29
End posion on genome 104
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
agttccaaaa
tRNA gene sequence 
CGGAGTTTAGCGCAGTTGGTAGCGCGCTACGTTCGGGACGTAGAGGTCGGGCGTTCGAAT
CGCCTAACTCCGACAA
Downstream region at tRNA end position 
aaaaaggaag
Secondary structure (Cloverleaf model)
>ENV08001302	Pro	CGG
                   a      ACAA aaaaaggaag
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     T - A          T A
                    T     T C C G C     A
      T G A        A      + | | | |     G
    T       C G C G       G G G C G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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