The detailed information of tRNA gene sequence


Sequence ID>WENV183761442
Genome IDPPYE01256931
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 16946
End posion on genome 17033
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaggaagcaa
tRNA gene sequence 
GGAAGTTTGGGTGAGTGGCTGAAACCACCAGTTTGCTAAACTGACGTGCGGGTTACCGTA
CCGGGGGTTCGAATCCCCCAGCTTCCGCtc
Downstream region at tRNA end position 
caaggcgtct
Secondary structure (Cloverleaf model)
>WENV183761442	Ser	GCT
                   a      GCtc caaggcgtct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTGCGGGTTACCGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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