The detailed information of tRNA gene sequence


Sequence ID>WENV183761626
Genome IDPPYE01258218
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 2621
End posion on genome 2549
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgattaattc
tRNA gene sequence 
GGTTCCTTGGATGAGTGGCTTAGTCAGTGGTCTGCAAAACCATGTACGGCGGTTCGAATC
CGCCAGGAACCTCgg
Downstream region at tRNA end position 
aggaaagcct
Secondary structure (Cloverleaf model)
>WENV183761626	Cys	GCA
                   c      TCgg aggaaagcct
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     T - A          T A
                    T     C C G C C     A
      T G A        G      | | | | |     G
    G       G T A G       G G C G G     C
    G         + | |                 T T
    C       A G T C
      T T          A     GTAC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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