The detailed information of tRNA gene sequence


Sequence ID>WENV183761657
Genome IDPPYE01258733
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 6626
End posion on genome 6553
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnaacat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCATTCGTTCGAGT
CGGATCTCCGCAACaa
Downstream region at tRNA end position 
catacggaat
Secondary structure (Cloverleaf model)
>WENV183761657	fMet	CAT
                   t      ACaa catacggaat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T A G G C     A
      T G A        G      | | + | |     G
    T       C G A G       A T T C G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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