The detailed information of tRNA gene sequence


Sequence ID>ENV08001307
Genome IDABMW01016898
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 103
End posion on genome 16
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ttaagagatt
tRNA gene sequence 
GCGCGGGTGGCGAAATTGGTAGACGCACCAGGTTTAGGTCCTGACGGTAGACAATACTGT
GGGGGTTCGAGTCCCCCCCCGCGCACCA
Downstream region at tRNA end position 
ccccatgtaa
Secondary structure (Cloverleaf model)
>ENV08001307	Leu	TAG
                   t      ACCA ccccatgtaa
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     G
    T       A G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGTAGACAATACTGT
                    C   A
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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